SRR934829
—
Clinical attributes
From the source cohort, normalized into canonical keys plus the project's native columns.
- cancer_type
- —
- cancer_type_detailed
- —
- subtype
- —
- overall_survival_months
- 22.371879106438897
- age_years
- 43
- sex
- Male
GSVA pathway preview (50 Hallmark scores)
Top 10 most elevated and top 10 most suppressed Hallmark pathways for this sample.
Top 10 elevated
- TNFA_SIGNALING_VIA_NFKB+0.622
- ANGIOGENESIS+0.611
- EPITHELIAL_MESENCHYMAL_TRANSITION+0.596
- IL6_JAK_STAT3_SIGNALING+0.585
- INFLAMMATORY_RESPONSE+0.536
- TGF_BETA_SIGNALING+0.498
- INTERFERON_GAMMA_RESPONSE+0.497
- IL2_STAT5_SIGNALING+0.458
- HYPOXIA+0.454
- APOPTOSIS+0.439
Top 10 suppressed
- KRAS_SIGNALING_DN-0.408
- SPERMATOGENESIS-0.383
- PANCREAS_BETA_CELLS-0.208
- BILE_ACID_METABOLISM-0.136
- OXIDATIVE_PHOSPHORYLATION-0.080
- MYOGENESIS-0.030
- WNT_BETA_CATENIN_SIGNALING-0.030
- PEROXISOME-0.007
- FATTY_ACID_METABOLISM-0.005
- ESTROGEN_RESPONSE_LATE+0.002
Patient twins — nearest pathway neighbors
10 samples closest to this one in 50-dim pathway space, drawn from the Pathway Atlas. Cosine similarity = 1 means identical pathway state.
10 twins match this tumor's tissue · 0 come from a different tissue of origin
| # | Sample | Cancer type | Subtype | cos similarity |
|---|---|---|---|---|
| 1 | SRR934866 | — | — | 0.981 |
| 2 | SRR934816 | — | — | 0.980 |
| 3 | 18D7DFBC-A1C6-4DA8-9AF1-3A6F3E2A03BE | — | — | 0.978 |
| 4 | SRR934845 | — | — | 0.975 |
| 5 | SRR934782 | — | — | 0.973 |
| 6 | SRR934926 | — | — | 0.972 |
| 7 | SRR934842 | — | — | 0.971 |
| 8 | SRR934750 | — | — | 0.970 |
| 9 | 44B1F003-553A-4C8A-A6AE-44C49262081C | — | — | 0.965 |
| 10 | SRR934913 | — | — | 0.963 |