TCGA-XF-A8HF-01A-11R-A36F-07
—
Clinical attributes
From the source cohort, normalized into canonical keys plus the project's native columns.
- cancer_type
- —
- cancer_type_detailed
- —
- subtype
- —
- overall_survival_months
- 97.04336399
- os_event
- true
- sex
- Male
GSVA pathway preview (50 Hallmark scores)
Top 10 most elevated and top 10 most suppressed Hallmark pathways for this sample.
Top 10 elevated
- PANCREAS_BETA_CELLS+0.290
- ANGIOGENESIS+0.280
- EPITHELIAL_MESENCHYMAL_TRANSITION+0.250
- KRAS_SIGNALING_DN+0.250
- XENOBIOTIC_METABOLISM+0.250
- BILE_ACID_METABOLISM+0.210
- CHOLESTEROL_HOMEOSTASIS+0.210
- SPERMATOGENESIS+0.190
- MYOGENESIS+0.180
- REACTIVE_OXYGEN_SPECIES_PATHWAY+0.180
Top 10 suppressed
- MITOTIC_SPINDLE-0.500
- MYC_TARGETS_V1-0.390
- PI3K_AKT_MTOR_SIGNALING-0.390
- INTERFERON_ALPHA_RESPONSE-0.380
- TGF_BETA_SIGNALING-0.380
- G2M_CHECKPOINT-0.370
- INTERFERON_GAMMA_RESPONSE-0.360
- MYC_TARGETS_V2-0.340
- PROTEIN_SECRETION-0.340
- UV_RESPONSE_DN-0.320
Patient twins — nearest pathway neighbors
10 samples closest to this one in 50-dim pathway space, drawn from the Pathway Atlas. Cosine similarity = 1 means identical pathway state.
7 twins match this tumor's tissue · 3 come from a different tissue of origin
| # | Sample | Cancer type | Subtype | cos similarity |
|---|---|---|---|---|
| 1 | TCGA-KQ-A41P-01A-12R-A33J-07 | — | — | 0.852 |
| 2 | SRR1441546 | GTEX | — | 0.842 |
| 3 | TCGA-OL-A66N-01A-12R-A31O-07 | — | B | 0.830 |
| 4 | TCGA-LL-A5YL-01A-12R-A29R-07 | — | B | 0.823 |
| 5 | MNG756 | — | — | 0.816 |
| 6 | TCGA-S5-A6DX-01A-11R-A31N-07 | — | — | 0.812 |
| 7 | TCGA-V7-A7HQ-01A-11R-A33J-07 | — | B | 0.812 |
| 8 | R57 | — | — | 0.808 |
| 9 | SRR1336158 | GTEX | — | 0.804 |
| 10 | SRR1316963 | GTEX | — | 0.803 |