MDT-AP-2913

Med · Medulloblastoma

ae24faca-1d05-5cd8-8263-8bcd78de958e

Score in workbench →

Clinical attributes

From the source cohort, normalized into canonical keys plus the project's native columns.

cancer_type: Med
cancer_type_detailed: —
subtype: Medulloblastoma
cancer_type: Med
subtype: Medulloblastoma
age_years: 40
new_clusters: C5
umap1_2d: 6.167664332
umap2_2d: 5.368332332
umap1_3d: 2.655331338
umap2_3d: -0.180779443
umap3_3d: -1.524137967
dataset: Med-Taylor

GSVA pathway preview (0 Hallmark scores)

MeasuredDerivedReference

Top 10 most elevated and top 10 most suppressed Hallmark pathways for this sample.

HTTPException: HTTP Error: Request returned HTTP 429 for HTTP HEAD to 'https://pub-e056b053afc04eec88337b62541f3025.r2.dev/oncoscape/medullo-epn-umap/date-based/gsva.parquet' LINE 1: SELECT pathway_library_id, pathway_name, gsva_score FROM read_parquet('https://pub-e056b053afc04eec88337b62541f3025... ^

Patient twins — nearest pathway neighbors

MeasuredDerived

10 samples closest to this one in 50-dim pathway space, drawn from the Pathway Atlas. Cosine similarity = 1 means identical pathway state.

3 twins match this tumor's tissue · 7 come from a different tissue of origin ← cross-tissue dominant

#	Sample	Cancer type	Subtype	cos similarity
1	SJEPD031111_D1.RNA-Seq medullo-epn-umap@date-based	EPN	EPN Tumor	0.900
2	TCGA-E9-A3Q9-01A-11R-A21T-07 breast-umap@18	—	B	0.888
3	BS_258RRGDM brain-umap@2	low-grade glioma	—	0.879
4	MDT-AP-3098 medullo-epn-umap@date-based	Med	Medulloblastoma	0.876
5	BS_QF5VVZX5 brain-umap@2	Ganglioglioma	—	0.874
6	MDT-AP-0208 medullo-epn-umap@date-based	Med	Medulloblastoma	0.873
7	SRR1360104 brain-umap@2	GTEX	—	0.871
8	BS_1ZVXF5FE brain-umap@2	pilocytic astrocytoma	—	0.869
9	BS_398KYV92 brain-umap@2	Meningioma	—	0.866
10	BS_B7X8VXQ3 brain-umap@2	Ganglioglioma	—	0.866