TCGA-BH-A1ET-01A-11R-A137-07
— · B
Clinical attributes
From the source cohort, normalized into canonical keys plus the project's native columns.
- cancer_type
- —
- cancer_type_detailed
- —
- subtype
- B
- subtype
- B
- overall_survival_months
- 84
- os_event
- true
GSVA pathway preview (50 Hallmark scores)
Top 10 most elevated and top 10 most suppressed Hallmark pathways for this sample.
Top 10 elevated
- PROTEIN_SECRETION+0.400
- TGF_BETA_SIGNALING+0.340
- UV_RESPONSE_DN+0.330
- ANDROGEN_RESPONSE+0.210
- ESTROGEN_RESPONSE_EARLY+0.180
- HEME_METABOLISM+0.140
- NOTCH_SIGNALING+0.120
- ADIPOGENESIS+0.050
- ANGIOGENESIS+0.050
- FATTY_ACID_METABOLISM+0.050
Top 10 suppressed
- MYC_TARGETS_V2-0.580
- E2F_TARGETS-0.530
- G2M_CHECKPOINT-0.430
- REACTIVE_OXYGEN_SPECIES_PATHWAY-0.390
- CHOLESTEROL_HOMEOSTASIS-0.360
- MYC_TARGETS_V1-0.350
- MYOGENESIS-0.300
- INTERFERON_ALPHA_RESPONSE-0.290
- UV_RESPONSE_UP-0.280
- DNA_REPAIR-0.270
Patient twins — nearest pathway neighbors
10 samples closest to this one in 50-dim pathway space, drawn from the Pathway Atlas. Cosine similarity = 1 means identical pathway state.
10 twins match this tumor's tissue · 0 come from a different tissue of origin
| # | Sample | Cancer type | Subtype | cos similarity |
|---|---|---|---|---|
| 1 | SRR1516042 | — | — | 0.850 |
| 2 | TCGA-C8-A1HE-01A-11R-A13Q-07 | — | B | 0.826 |
| 3 | SRR1516046 | — | — | 0.807 |
| 4 | TCGA-A7-A26E-01A-11R-A169-07 | — | B | 0.805 |
| 5 | TCGA-BH-A1F5-01A-12R-A13Q-07 | — | B | 0.788 |
| 6 | TCGA-A7-A13G-01A-11R-A13Q-07 | — | D | 0.784 |
| 7 | TCGA-44-6146-01A-11R-A278-07 | — | cohortA1 | 0.784 |
| 8 | SRR8518225 | — | B | 0.780 |
| 9 | TCGA-A7-A0DB-01A-11R-A277-07 | — | D | 0.774 |
| 10 | TCGA-D8-A1XO-01A-11R-A14M-07 | — | B | 0.772 |