AUR-AFR2-TTP1-A-1-1-R-A742-41
— · C
Clinical attributes
From the source cohort, normalized into canonical keys plus the project's native columns.
- cancer_type
- —
- cancer_type_detailed
- —
- subtype
- C
- subtype
- C
GSVA pathway preview (50 Hallmark scores)
Top 10 most elevated and top 10 most suppressed Hallmark pathways for this sample.
Top 10 elevated
- ALLOGRAFT_REJECTION+0.530
- INTERFERON_GAMMA_RESPONSE+0.450
- INTERFERON_ALPHA_RESPONSE+0.400
- ADIPOGENESIS+0.360
- FATTY_ACID_METABOLISM+0.360
- IL6_JAK_STAT3_SIGNALING+0.360
- BILE_ACID_METABOLISM+0.340
- KRAS_SIGNALING_UP+0.340
- COMPLEMENT+0.330
- EPITHELIAL_MESENCHYMAL_TRANSITION+0.330
Top 10 suppressed
- NOTCH_SIGNALING-0.360
- WNT_BETA_CATENIN_SIGNALING-0.340
- HEDGEHOG_SIGNALING-0.310
- MITOTIC_SPINDLE-0.310
- TGF_BETA_SIGNALING-0.260
- MYC_TARGETS_V2-0.210
- G2M_CHECKPOINT-0.200
- UV_RESPONSE_DN-0.140
- APICAL_SURFACE-0.100
- UNFOLDED_PROTEIN_RESPONSE-0.090
Patient twins — nearest pathway neighbors
10 samples closest to this one in 50-dim pathway space, drawn from the Pathway Atlas. Cosine similarity = 1 means identical pathway state.
8 twins match this tumor's tissue · 2 come from a different tissue of origin
| # | Sample | Cancer type | Subtype | cos similarity |
|---|---|---|---|---|
| 1 | TCGA-35-4122-01A-01R-1107-07 | — | cohortA1 | 0.870 |
| 2 | TCGA-XF-A9SJ-01A-11R-A39I-07 | — | — | 0.866 |
| 3 | SRR1321853 | GTEX | — | 0.862 |
| 4 | 551ADCCD-D116-43D8-AABC-E7E111D79E70 | — | — | 0.859 |
| 5 | TCGA-34-5241-01A-01R-1443-07 | — | cohortSQ1 | 0.857 |
| 6 | AUR-AFUI-TTM1-A-1-0-R-A743-41 | — | C | 0.847 |
| 7 | 608d8ca8-8eeb-40a1-a95b-57eefcabbdab | — | — | 0.846 |
| 8 | SRR660661 | GTEX | — | 0.843 |
| 9 | B14E4A93-3186-42D4-A36C-EB287EFFC653 | — | — | 0.834 |
| 10 | TCGA-50-5066-01A-01R-1628-07 | — | cohortA1 | 0.834 |