TCGA-69-8453-01A-12R-2326-07
— · cohortA1
Clinical attributes
From the source cohort, normalized into canonical keys plus the project's native columns.
- cancer_type
- —
- cancer_type_detailed
- —
- subtype
- cohortA1
- subtype
- cohortA1
- age_years
- 77
GSVA pathway preview (50 Hallmark scores)
Top 10 most elevated and top 10 most suppressed Hallmark pathways for this sample.
Top 10 elevated
- IL6_JAK_STAT3_SIGNALING+0.530
- INFLAMMATORY_RESPONSE+0.530
- INTERFERON_ALPHA_RESPONSE+0.520
- TNFA_SIGNALING_VIA_NFKB+0.520
- COAGULATION+0.490
- INTERFERON_GAMMA_RESPONSE+0.490
- COMPLEMENT+0.470
- ALLOGRAFT_REJECTION+0.450
- KRAS_SIGNALING_UP+0.430
- IL2_STAT5_SIGNALING+0.400
Top 10 suppressed
- E2F_TARGETS-0.640
- MYC_TARGETS_V1-0.630
- G2M_CHECKPOINT-0.560
- MYC_TARGETS_V2-0.530
- UNFOLDED_PROTEIN_RESPONSE-0.460
- OXIDATIVE_PHOSPHORYLATION-0.440
- DNA_REPAIR-0.410
- MTORC1_SIGNALING-0.400
- GLYCOLYSIS-0.360
- PROTEIN_SECRETION-0.350
Patient twins — nearest pathway neighbors
10 samples closest to this one in 50-dim pathway space, drawn from the Pathway Atlas. Cosine similarity = 1 means identical pathway state.
3 twins match this tumor's tissue · 7 come from a different tissue of origin ← cross-tissue dominant
| # | Sample | Cancer type | Subtype | cos similarity |
|---|---|---|---|---|
| 1 | TCGA-56-8623-01A-11R-A28V-07 | — | cohortA1 | 0.953 |
| 2 | sclcWD22563_S71.txt | — | cohortMD2 | 0.942 |
| 3 | sclcA055A_S52.txt | — | cohortMD2 | 0.932 |
| 4 | MDT-AP-1152 | Med | Medulloblastoma | 0.931 |
| 5 | BS_044XZ8ST | pilocytic astrocytoma | — | 0.931 |
| 6 | BS_NYS8TRCB | low-grade glioma | — | 0.930 |
| 7 | BS_R244Z0WX | pilocytic astrocytoma | — | 0.930 |
| 8 | SRR1352954 | GTEX | — | 0.927 |
| 9 | BS_3XY76V8T | Ganglioglioma | — | 0.926 |
| 10 | BS_BA6AZWB3 | Med | Medulloblastoma | 0.925 |