83a1d91a-3e74-4106-96d1-eec558404c29
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Clinical attributes
From the source cohort, normalized into canonical keys plus the project's native columns.
- cancer_type
- —
- cancer_type_detailed
- —
- subtype
- —
- age_years
- 70
GSVA pathway preview (50 Hallmark scores)
Top 10 most elevated and top 10 most suppressed Hallmark pathways for this sample.
Top 10 elevated
- E2F_TARGETS+0.530
- G2M_CHECKPOINT+0.520
- MYC_TARGETS_V2+0.460
- ALLOGRAFT_REJECTION+0.380
- MYC_TARGETS_V1+0.380
- MTORC1_SIGNALING+0.340
- INTERFERON_GAMMA_RESPONSE+0.310
- SPERMATOGENESIS+0.300
- INTERFERON_ALPHA_RESPONSE+0.280
- MITOTIC_SPINDLE+0.250
Top 10 suppressed
- EPITHELIAL_MESENCHYMAL_TRANSITION-0.460
- ANGIOGENESIS-0.450
- COAGULATION-0.390
- MYOGENESIS-0.390
- APICAL_JUNCTION-0.300
- PROTEIN_SECRETION-0.280
- OXIDATIVE_PHOSPHORYLATION-0.260
- FATTY_ACID_METABOLISM-0.240
- REACTIVE_OXYGEN_SPECIES_PATHWAY-0.220
- P53_PATHWAY-0.210
Patient twins — nearest pathway neighbors
10 samples closest to this one in 50-dim pathway space, drawn from the Pathway Atlas. Cosine similarity = 1 means identical pathway state.
10 twins match this tumor's tissue · 0 come from a different tissue of origin
| # | Sample | Cancer type | Subtype | cos similarity |
|---|---|---|---|---|
| 1 | MBCProject_1819_T1_RNA | — | C | 0.844 |
| 2 | TCGA-BH-A1FC-01A-11R-A13Q-07 | — | E | 0.838 |
| 3 | SRR10900596 | — | — | 0.829 |
| 4 | SRR5088891 | — | — | 0.821 |
| 5 | TCGA-CN-A499-01A-11R-A24H-07 | — | — | 0.799 |
| 6 | TCGA-GM-A2DH-01A-11R-A180-07 | — | C | 0.788 |
| 7 | TCGA-E2-A1L7-01A-11R-A144-07 | — | C | 0.787 |
| 8 | d708a0d7-edda-46a8-b717-1b48c073c828 | — | — | 0.787 |
| 9 | MBCproject_0095_T3_RNA | — | E | 0.786 |
| 10 | TCGA-E2-A1LI-01A-12R-A157-07 | — | E | 0.783 |