R352
—
Clinical attributes
From the source cohort, normalized into canonical keys plus the project's native columns.
- cancer_type
- —
- cancer_type_detailed
- —
- subtype
- —
- overall_survival_months
- 102
- sex
- Female
GSVA pathway preview (50 Hallmark scores)
Top 10 most elevated and top 10 most suppressed Hallmark pathways for this sample.
Top 10 elevated
- PANCREAS_BETA_CELLS+0.390
- KRAS_SIGNALING_UP+0.260
- ANDROGEN_RESPONSE+0.220
- ANGIOGENESIS+0.220
- KRAS_SIGNALING_DN+0.190
- COAGULATION+0.130
- TGF_BETA_SIGNALING+0.110
- PROTEIN_SECRETION+0.090
- SPERMATOGENESIS+0.090
- ESTROGEN_RESPONSE_EARLY+0.080
Top 10 suppressed
- E2F_TARGETS-0.440
- WNT_BETA_CATENIN_SIGNALING-0.420
- REACTIVE_OXYGEN_SPECIES_PATHWAY-0.400
- G2M_CHECKPOINT-0.390
- MYC_TARGETS_V2-0.390
- DNA_REPAIR-0.380
- CHOLESTEROL_HOMEOSTASIS-0.350
- INTERFERON_ALPHA_RESPONSE-0.350
- MITOTIC_SPINDLE-0.350
- NOTCH_SIGNALING-0.320
Patient twins — nearest pathway neighbors
10 samples closest to this one in 50-dim pathway space, drawn from the Pathway Atlas. Cosine similarity = 1 means identical pathway state.
7 twins match this tumor's tissue · 3 come from a different tissue of origin
| # | Sample | Cancer type | Subtype | cos similarity |
|---|---|---|---|---|
| 1 | SRR8942991 | — | — | 0.872 |
| 2 | MNG608 | — | — | 0.839 |
| 3 | C3N-03911 | — | cohortA1 | 0.823 |
| 4 | SRR661818 | GTEX | — | 0.808 |
| 5 | AUR-AD9J-TTP1-B-4-0-R-A584-39 | — | D | 0.804 |
| 6 | MNG204 | — | — | 0.803 |
| 7 | MDT-AP-2913 | Med | Medulloblastoma | 0.803 |
| 8 | TCGA-H4-A2HO-01A-11R-A180-07 | — | — | 0.801 |
| 9 | BS_NFRXNAFE | ganglioneuroblastoma | — | 0.792 |
| 10 | SRR10900003 | — | — | 0.790 |