f5760366-59eb-417d-a935-3f78e999dd42
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Clinical attributes
From the source cohort, normalized into canonical keys plus the project's native columns.
- cancer_type
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- cancer_type_detailed
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- subtype
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GSVA pathway preview (50 Hallmark scores)
Top 10 most elevated and top 10 most suppressed Hallmark pathways for this sample.
Top 10 elevated
- INTERFERON_ALPHA_RESPONSE+0.700
- ALLOGRAFT_REJECTION+0.600
- INTERFERON_GAMMA_RESPONSE+0.600
- IL6_JAK_STAT3_SIGNALING+0.500
- INFLAMMATORY_RESPONSE+0.400
- COMPLEMENT+0.300
- PANCREAS_BETA_CELLS+0.300
- COAGULATION+0.200
- IL2_STAT5_SIGNALING+0.200
- KRAS_SIGNALING_UP+0.200
Top 10 suppressed
- MYC_TARGETS_V2-0.400
- NOTCH_SIGNALING-0.400
- TGF_BETA_SIGNALING-0.400
- E2F_TARGETS-0.300
- MITOTIC_SPINDLE-0.300
- MYC_TARGETS_V1-0.300
- PROTEIN_SECRETION-0.300
- UV_RESPONSE_DN-0.300
- ADIPOGENESIS-0.200
- ANDROGEN_RESPONSE-0.200
Patient twins — nearest pathway neighbors
10 samples closest to this one in 50-dim pathway space, drawn from the Pathway Atlas. Cosine similarity = 1 means identical pathway state.
10 twins match this tumor's tissue · 0 come from a different tissue of origin
| # | Sample | Cancer type | Subtype | cos similarity |
|---|---|---|---|---|
| 1 | SAMN03290925 | — | — | 0.894 |
| 2 | R13 | — | — | 0.865 |
| 3 | 94b2af92-0cfc-40b2-977d-6bd0fa4440d9 | — | — | 0.865 |
| 4 | SRR25617853 | — | D | 0.860 |
| 5 | SRR8518255 | — | D | 0.855 |
| 6 | TCGA-55-6987-01A-11R-1949-07 | — | cohortMD2 | 0.852 |
| 7 | 5566453e-df41-4aab-8dd0-825efbece954 | — | — | 0.843 |
| 8 | aeac6db7-09bd-45f9-a5fd-c8358f86bff8 | — | — | 0.841 |
| 9 | TCGA-AC-A5XS-01A-11R-A29R-07 | — | B | 0.839 |
| 10 | ff12dc45-d7ab-45ae-a049-2d20e3c546b6 | — | — | 0.839 |