SRR934925
—
Clinical attributes
From the source cohort, normalized into canonical keys plus the project's native columns.
- cancer_type
- —
- cancer_type_detailed
- —
- subtype
- —
- overall_survival_months
- 31.701708278580814
- age_years
- 26
- sex
- Female
GSVA pathway preview (50 Hallmark scores)
Top 10 most elevated and top 10 most suppressed Hallmark pathways for this sample.
Top 10 elevated
- INTERFERON_ALPHA_RESPONSE+0.645
- INTERFERON_GAMMA_RESPONSE+0.587
- E2F_TARGETS+0.584
- G2M_CHECKPOINT+0.538
- MYC_TARGETS_V1+0.524
- PROTEIN_SECRETION+0.460
- IL6_JAK_STAT3_SIGNALING+0.425
- DNA_REPAIR+0.416
- ALLOGRAFT_REJECTION+0.405
- MITOTIC_SPINDLE+0.394
Top 10 suppressed
- KRAS_SIGNALING_DN-0.430
- PANCREAS_BETA_CELLS-0.326
- APICAL_SURFACE-0.209
- MYOGENESIS-0.203
- SPERMATOGENESIS-0.126
- HEDGEHOG_SIGNALING-0.106
- XENOBIOTIC_METABOLISM-0.098
- ESTROGEN_RESPONSE_EARLY-0.089
- ESTROGEN_RESPONSE_LATE-0.047
- BILE_ACID_METABOLISM-0.003
Patient twins — nearest pathway neighbors
10 samples closest to this one in 50-dim pathway space, drawn from the Pathway Atlas. Cosine similarity = 1 means identical pathway state.
10 twins match this tumor's tissue · 0 come from a different tissue of origin
| # | Sample | Cancer type | Subtype | cos similarity |
|---|---|---|---|---|
| 1 | SRR934802 | — | — | 0.967 |
| 2 | SRR934895 | — | — | 0.958 |
| 3 | SRR934730 | — | — | 0.955 |
| 4 | 62966348-1C16-4A6D-AA82-707B3F759D5C | — | — | 0.949 |
| 5 | SRR934846 | — | — | 0.948 |
| 6 | SRR934839 | — | — | 0.948 |
| 7 | D494D692-9EC2-429A-A0FE-696D2A152D4A | — | — | 0.946 |
| 8 | 769432C5-4BFD-4689-8F43-467010292448 | — | — | 0.945 |
| 9 | SRR934840 | — | — | 0.944 |
| 10 | DC01D165-E257-49D6-8B9B-37CA7DE398F6 | — | — | 0.940 |