TCGA-GM-A2DC-01A-11R-A18M-07
— · B
Clinical attributes
From the source cohort, normalized into canonical keys plus the project's native columns.
- cancer_type
- —
- cancer_type_detailed
- —
- subtype
- B
- subtype
- B
- overall_survival_months
- 84
- os_event
- false
GSVA pathway preview (50 Hallmark scores)
Top 10 most elevated and top 10 most suppressed Hallmark pathways for this sample.
Top 10 elevated
- OXIDATIVE_PHOSPHORYLATION+0.300
- BILE_ACID_METABOLISM+0.270
- DNA_REPAIR+0.230
- ADIPOGENESIS+0.190
- PEROXISOME+0.160
- REACTIVE_OXYGEN_SPECIES_PATHWAY+0.130
- MYC_TARGETS_V2+0.100
- PANCREAS_BETA_CELLS+0.060
- HEME_METABOLISM+0.010
- MYOGENESIS+0.010
Top 10 suppressed
- E2F_TARGETS-0.560
- G2M_CHECKPOINT-0.560
- EPITHELIAL_MESENCHYMAL_TRANSITION-0.480
- INTERFERON_ALPHA_RESPONSE-0.480
- INFLAMMATORY_RESPONSE-0.470
- INTERFERON_GAMMA_RESPONSE-0.450
- MITOTIC_SPINDLE-0.410
- ALLOGRAFT_REJECTION-0.340
- HEDGEHOG_SIGNALING-0.340
- IL2_STAT5_SIGNALING-0.330
Patient twins — nearest pathway neighbors
10 samples closest to this one in 50-dim pathway space, drawn from the Pathway Atlas. Cosine similarity = 1 means identical pathway state.
9 twins match this tumor's tissue · 1 come from a different tissue of origin
| # | Sample | Cancer type | Subtype | cos similarity |
|---|---|---|---|---|
| 1 | TCGA-LL-A6FP-01A-11R-A31O-07 | — | B | 0.913 |
| 2 | TCGA-CF-A5U8-01A-11R-A28M-07 | — | — | 0.894 |
| 3 | TCGA-55-6972-01A-11R-1949-07 | — | cohortA2 | 0.886 |
| 4 | TCGA-BH-A0HN-01A-11R-A10U-07 | — | B | 0.880 |
| 5 | BS_V9HVBBDW | Med | Medulloblastoma | 0.870 |
| 6 | TCGA-CF-A47W-01A-11R-A23W-07 | — | — | 0.868 |
| 7 | SRR2016961 | — | — | 0.859 |
| 8 | MNG1050 | — | — | 0.857 |
| 9 | cf2834ac-00ed-4372-be25-042f38241196 | — | — | 0.855 |
| 10 | TCGA-AO-A12H-01A-11R-A115-07 | — | B | 0.854 |