TCGA-BA-A6DB-01A-11R-A30B-07
—
Clinical attributes
From the source cohort, normalized into canonical keys plus the project's native columns.
- cancer_type
- —
- cancer_type_detailed
- —
- subtype
- —
- sex
- female
GSVA pathway preview (50 Hallmark scores)
Top 10 most elevated and top 10 most suppressed Hallmark pathways for this sample.
Top 10 elevated
- MYOGENESIS+0.510
- ALLOGRAFT_REJECTION+0.380
- INTERFERON_ALPHA_RESPONSE+0.360
- OXIDATIVE_PHOSPHORYLATION+0.350
- BILE_ACID_METABOLISM+0.330
- INTERFERON_GAMMA_RESPONSE+0.330
- KRAS_SIGNALING_UP+0.300
- KRAS_SIGNALING_DN+0.280
- COAGULATION+0.270
- PANCREAS_BETA_CELLS+0.270
Top 10 suppressed
- G2M_CHECKPOINT-0.610
- E2F_TARGETS-0.590
- MITOTIC_SPINDLE-0.560
- MTORC1_SIGNALING-0.400
- UNFOLDED_PROTEIN_RESPONSE-0.400
- PROTEIN_SECRETION-0.390
- MYC_TARGETS_V2-0.370
- TGF_BETA_SIGNALING-0.360
- GLYCOLYSIS-0.330
- MYC_TARGETS_V1-0.310
Patient twins — nearest pathway neighbors
10 samples closest to this one in 50-dim pathway space, drawn from the Pathway Atlas. Cosine similarity = 1 means identical pathway state.
4 twins match this tumor's tissue · 6 come from a different tissue of origin ← cross-tissue dominant
| # | Sample | Cancer type | Subtype | cos similarity |
|---|---|---|---|---|
| 1 | TCGA-50-6597-01A-11R-1858-07 | — | cohortA1 | 0.884 |
| 2 | ERR2598328 | fetal | fetal | 0.875 |
| 3 | ERR2598280 | fetal | fetal | 0.874 |
| 4 | ERR2598335 | fetal | fetal | 0.873 |
| 5 | TCGA-44-2661-01A-01R-1107-07 | — | cohortA1 | 0.872 |
| 6 | C3L-02560 | — | cohortA1 | 0.861 |
| 7 | ERR2598320 | fetal | fetal | 0.860 |
| 8 | TCGA-34-5234-01A-01R-1635-07 | — | cohortSQ1 | 0.858 |
| 9 | SRR656167 | GTEX | — | 0.858 |
| 10 | SRR1430570 | GTEX | — | 0.854 |