TCGA-CV-7410-01A-21R-2081-07
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Clinical attributes
From the source cohort, normalized into canonical keys plus the project's native columns.
- cancer_type
- —
- cancer_type_detailed
- —
- subtype
- —
- overall_survival_months
- 1.465068493
- sex
- male
GSVA pathway preview (50 Hallmark scores)
Top 10 most elevated and top 10 most suppressed Hallmark pathways for this sample.
Top 10 elevated
- ALLOGRAFT_REJECTION+0.510
- INTERFERON_GAMMA_RESPONSE+0.350
- COMPLEMENT+0.300
- IL2_STAT5_SIGNALING+0.270
- IL6_JAK_STAT3_SIGNALING+0.270
- INTERFERON_ALPHA_RESPONSE+0.270
- KRAS_SIGNALING_UP+0.250
- ANGIOGENESIS+0.130
- BILE_ACID_METABOLISM+0.130
- HYPOXIA+0.100
Top 10 suppressed
- MYC_TARGETS_V2-0.600
- OXIDATIVE_PHOSPHORYLATION-0.510
- MYC_TARGETS_V1-0.420
- REACTIVE_OXYGEN_SPECIES_PATHWAY-0.370
- CHOLESTEROL_HOMEOSTASIS-0.360
- DNA_REPAIR-0.330
- UNFOLDED_PROTEIN_RESPONSE-0.320
- ESTROGEN_RESPONSE_LATE-0.310
- MTORC1_SIGNALING-0.310
- UV_RESPONSE_UP-0.300
Patient twins — nearest pathway neighbors
10 samples closest to this one in 50-dim pathway space, drawn from the Pathway Atlas. Cosine similarity = 1 means identical pathway state.
10 twins match this tumor's tissue · 0 come from a different tissue of origin
| # | Sample | Cancer type | Subtype | cos similarity |
|---|---|---|---|---|
| 1 | C3N-00433 | — | cohortMD2 | 0.879 |
| 2 | C3L-03976 | — | cohortMD2 | 0.847 |
| 3 | SRR12696760 | — | — | 0.836 |
| 4 | SRR6013504 | — | cohortMD2 | 0.834 |
| 5 | SRR12202486 | — | — | 0.830 |
| 6 | s0122308 | — | — | 0.826 |
| 7 | 7ca9c52f-2d6e-4868-b4e8-9dd7937f6b2b | — | — | 0.825 |
| 8 | DRR168597 | — | — | 0.823 |
| 9 | cfbdbfeb-7550-46dc-bd3b-bf85c4a14443 | — | — | 0.823 |
| 10 | ee0e68bf-7fa0-4edc-a9df-30a63c2db34a | — | — | 0.823 |