MNG949
—
Clinical attributes
From the source cohort, normalized into canonical keys plus the project's native columns.
- cancer_type
- —
- cancer_type_detailed
- —
- subtype
- —
GSVA pathway preview (50 Hallmark scores)
Top 10 most elevated and top 10 most suppressed Hallmark pathways for this sample.
Top 10 elevated
- INTERFERON_ALPHA_RESPONSE+0.437
- CHOLESTEROL_HOMEOSTASIS+0.371
- OXIDATIVE_PHOSPHORYLATION+0.371
- BILE_ACID_METABOLISM+0.360
- TNFA_SIGNALING_VIA_NFKB+0.312
- ADIPOGENESIS+0.302
- INTERFERON_GAMMA_RESPONSE+0.298
- PROTEIN_SECRETION+0.282
- FATTY_ACID_METABOLISM+0.237
- PEROXISOME+0.228
Top 10 suppressed
- ANGIOGENESIS-0.303
- EPITHELIAL_MESENCHYMAL_TRANSITION-0.278
- MYC_TARGETS_V2-0.214
- PANCREAS_BETA_CELLS-0.207
- ALLOGRAFT_REJECTION-0.167
- MYOGENESIS-0.152
- GLYCOLYSIS-0.146
- COAGULATION-0.144
- APICAL_JUNCTION-0.141
- HYPOXIA-0.135
Patient twins — nearest pathway neighbors
10 samples closest to this one in 50-dim pathway space, drawn from the Pathway Atlas. Cosine similarity = 1 means identical pathway state.
9 twins match this tumor's tissue · 1 come from a different tissue of origin
| # | Sample | Cancer type | Subtype | cos similarity |
|---|---|---|---|---|
| 1 | R149 | — | — | 0.706 |
| 2 | TCGA-D8-A1JT-01A-31R-A13Q-07 | — | B | 0.698 |
| 3 | C6DB59E1-4D60-4B22-9417-CD1D044B75E8 | — | — | 0.697 |
| 4 | TCGA-CV-5439-01A-01R-1686-07 | — | — | 0.695 |
| 5 | TCGA-C8-A26V-01A-11R-A16F-07 | — | B | 0.688 |
| 6 | BS_N210XMKR | low-grade glioma | — | 0.683 |
| 7 | SRR6013502 | — | cohortA1 | 0.681 |
| 8 | 4769f22f-eeaf-4108-9555-55cc5d6ae27b | — | — | 0.677 |
| 9 | AE988295-3046-4778-81C5-B787CAC92268 | — | — | 0.672 |
| 10 | MBCProject_2741_T1A_RNA | — | C | 0.672 |