SRR1464305
GTEX
Clinical attributes
From the source cohort, normalized into canonical keys plus the project's native columns.
- cancer_type
- GTEX
- cancer_type_detailed
- —
- subtype
- —
- cancer_type
- GTEX
- sex
- Male
GSVA pathway preview (50 Hallmark scores)
Top 10 most elevated and top 10 most suppressed Hallmark pathways for this sample.
Top 10 elevated
- KRAS_SIGNALING_DN+0.169
- DNA_REPAIR+0.128
- MYC_TARGETS_V2+0.061
- UNFOLDED_PROTEIN_RESPONSE+0.003
- MYC_TARGETS_V1-0.001
- OXIDATIVE_PHOSPHORYLATION-0.015
- SPERMATOGENESIS-0.018
- MITOTIC_SPINDLE-0.026
- MYOGENESIS-0.027
- PEROXISOME-0.066
Top 10 suppressed
- INTERFERON_ALPHA_RESPONSE-0.579
- INFLAMMATORY_RESPONSE-0.532
- INTERFERON_GAMMA_RESPONSE-0.509
- TNFA_SIGNALING_VIA_NFKB-0.489
- ALLOGRAFT_REJECTION-0.484
- EPITHELIAL_MESENCHYMAL_TRANSITION-0.482
- IL6_JAK_STAT3_SIGNALING-0.478
- KRAS_SIGNALING_UP-0.433
- COMPLEMENT-0.432
- ANGIOGENESIS-0.429
Patient twins — nearest pathway neighbors
10 samples closest to this one in 50-dim pathway space, drawn from the Pathway Atlas. Cosine similarity = 1 means identical pathway state.
10 twins match this tumor's tissue · 0 come from a different tissue of origin
| # | Sample | Cancer type | Subtype | cos similarity |
|---|---|---|---|---|
| 1 | SRR1490568 | GTEX | — | 0.991 |
| 2 | SRR1359367 | GTEX | — | 0.989 |
| 3 | SRR1352415 | GTEX | — | 0.987 |
| 4 | SRR1441224 | GTEX | — | 0.987 |
| 5 | SRR1499982 | GTEX | — | 0.987 |
| 6 | SRR807657 | GTEX | — | 0.987 |
| 7 | SRR1456531 | GTEX | — | 0.987 |
| 8 | SRR1357413 | GTEX | — | 0.987 |
| 9 | SRR1401552 | GTEX | — | 0.986 |
| 10 | SRR1319672 | GTEX | — | 0.985 |