TCGA-B6-A40B-01A-11R-A239-07
— · B
Clinical attributes
From the source cohort, normalized into canonical keys plus the project's native columns.
- cancer_type
- —
- cancer_type_detailed
- —
- subtype
- B
- subtype
- B
- overall_survival_months
- 105
- os_event
- false
GSVA pathway preview (50 Hallmark scores)
Top 10 most elevated and top 10 most suppressed Hallmark pathways for this sample.
Top 10 elevated
- TNFA_SIGNALING_VIA_NFKB+0.460
- EPITHELIAL_MESENCHYMAL_TRANSITION+0.400
- ESTROGEN_RESPONSE_EARLY+0.370
- COAGULATION+0.340
- ESTROGEN_RESPONSE_LATE+0.340
- MYOGENESIS+0.330
- P53_PATHWAY+0.280
- KRAS_SIGNALING_DN+0.260
- ANGIOGENESIS+0.240
- XENOBIOTIC_METABOLISM+0.240
Top 10 suppressed
- PROTEIN_SECRETION-0.480
- INTERFERON_ALPHA_RESPONSE-0.460
- E2F_TARGETS-0.360
- G2M_CHECKPOINT-0.360
- MTORC1_SIGNALING-0.340
- INTERFERON_GAMMA_RESPONSE-0.330
- MITOTIC_SPINDLE-0.310
- MYC_TARGETS_V1-0.290
- HEME_METABOLISM-0.200
- ADIPOGENESIS-0.160
Patient twins — nearest pathway neighbors
10 samples closest to this one in 50-dim pathway space, drawn from the Pathway Atlas. Cosine similarity = 1 means identical pathway state.
10 twins match this tumor's tissue · 0 come from a different tissue of origin
| # | Sample | Cancer type | Subtype | cos similarity |
|---|---|---|---|---|
| 1 | TCGA-E2-A1IF-01A-11R-A144-07 | — | A | 0.838 |
| 2 | MBCProject_0988_T1_RNA | — | B | 0.829 |
| 3 | R236 | — | — | 0.798 |
| 4 | R24 | — | — | 0.797 |
| 5 | TCGA-B6-A401-01A-11R-A239-07 | — | B | 0.791 |
| 6 | MBCProject_3632_T1_RNA | — | B | 0.787 |
| 7 | MNG74 | — | — | 0.784 |
| 8 | MNG1249 | — | — | 0.782 |
| 9 | TCGA-3C-AALK-01A-11R-A41B-07 | — | A | 0.782 |
| 10 | TCGA-A2-A0CP-01A-11R-A034-07 | — | A | 0.782 |