SRR1313141
— · E
Clinical attributes
From the source cohort, normalized into canonical keys plus the project's native columns.
- cancer_type
- —
- cancer_type_detailed
- —
- subtype
- E
- subtype
- E
GSVA pathway preview (50 Hallmark scores)
Top 10 most elevated and top 10 most suppressed Hallmark pathways for this sample.
Top 10 elevated
- MYC_TARGETS_V2+0.260
- DNA_REPAIR+0.160
- WNT_BETA_CATENIN_SIGNALING+0.150
- G2M_CHECKPOINT+0.130
- E2F_TARGETS+0.110
- MITOTIC_SPINDLE+0.090
- SPERMATOGENESIS+0.090
- HEDGEHOG_SIGNALING+0.020
- MYC_TARGETS_V1-0.080
- NOTCH_SIGNALING-0.100
Top 10 suppressed
- EPITHELIAL_MESENCHYMAL_TRANSITION-0.550
- INTERFERON_GAMMA_RESPONSE-0.510
- INFLAMMATORY_RESPONSE-0.500
- ESTROGEN_RESPONSE_EARLY-0.490
- ALLOGRAFT_REJECTION-0.480
- IL6_JAK_STAT3_SIGNALING-0.480
- IL2_STAT5_SIGNALING-0.470
- TNFA_SIGNALING_VIA_NFKB-0.470
- INTERFERON_ALPHA_RESPONSE-0.460
- ANDROGEN_RESPONSE-0.450
Patient twins — nearest pathway neighbors
10 samples closest to this one in 50-dim pathway space, drawn from the Pathway Atlas. Cosine similarity = 1 means identical pathway state.
4 twins match this tumor's tissue · 6 come from a different tissue of origin ← cross-tissue dominant
| # | Sample | Cancer type | Subtype | cos similarity |
|---|---|---|---|---|
| 1 | BS_A87NPZAP | medulloblastoma | — | 0.956 |
| 2 | SRR1313143 | — | E | 0.946 |
| 3 | BS_4W68NV3M | medulloblastoma | — | 0.943 |
| 4 | BS_QRDT19KS | medulloblastoma | — | 0.933 |
| 5 | s_150324_3b | EPN | Posterior Fossa EPN | 0.930 |
| 6 | SRR650166 | — | — | 0.918 |
| 7 | MDT-AP-1193 | Med | Medulloblastoma | 0.917 |
| 8 | SAMN03290905 | — | — | 0.916 |
| 9 | SRR8518343 | — | E | 0.916 |
| 10 | BS_3NWQXPQV | medulloblastoma | — | 0.913 |