SRR1329334
GTEX
Clinical attributes
From the source cohort, normalized into canonical keys plus the project's native columns.
- cancer_type
- GTEX
- cancer_type_detailed
- —
- subtype
- —
- cancer_type
- GTEX
- sex
- Male
GSVA pathway preview (50 Hallmark scores)
Top 10 most elevated and top 10 most suppressed Hallmark pathways for this sample.
Top 10 elevated
- PANCREAS_BETA_CELLS+0.279
- KRAS_SIGNALING_DN+0.275
- HEDGEHOG_SIGNALING+0.249
- SPERMATOGENESIS+0.192
- PEROXISOME-0.003
- APICAL_SURFACE-0.025
- UV_RESPONSE_UP-0.036
- ESTROGEN_RESPONSE_EARLY-0.037
- WNT_BETA_CATENIN_SIGNALING-0.039
- ESTROGEN_RESPONSE_LATE-0.058
Top 10 suppressed
- IL6_JAK_STAT3_SIGNALING-0.511
- INTERFERON_ALPHA_RESPONSE-0.498
- G2M_CHECKPOINT-0.486
- INTERFERON_GAMMA_RESPONSE-0.443
- E2F_TARGETS-0.433
- ALLOGRAFT_REJECTION-0.425
- COMPLEMENT-0.418
- TGF_BETA_SIGNALING-0.410
- MYC_TARGETS_V1-0.405
- ANGIOGENESIS-0.400
Patient twins — nearest pathway neighbors
10 samples closest to this one in 50-dim pathway space, drawn from the Pathway Atlas. Cosine similarity = 1 means identical pathway state.
10 twins match this tumor's tissue · 0 come from a different tissue of origin
| # | Sample | Cancer type | Subtype | cos similarity |
|---|---|---|---|---|
| 1 | SRR1321183 | GTEX | — | 0.954 |
| 2 | SRR1443713 | GTEX | — | 0.936 |
| 3 | SRR1334717 | GTEX | — | 0.936 |
| 4 | SRR1311182 | GTEX | — | 0.925 |
| 5 | SRR1356036 | GTEX | — | 0.924 |
| 6 | SRR1477634 | GTEX | — | 0.915 |
| 7 | SRR1435536 | GTEX | — | 0.915 |
| 8 | SRR1343841 | GTEX | — | 0.913 |
| 9 | SRR1485892 | GTEX | — | 0.913 |
| 10 | SRR1417047 | GTEX | — | 0.911 |