TCGA-C8-A3M7-01A-12R-A21T-07
— · A
Clinical attributes
From the source cohort, normalized into canonical keys plus the project's native columns.
- cancer_type
- —
- cancer_type_detailed
- —
- subtype
- A
- subtype
- A
- overall_survival_months
- 34
GSVA pathway preview (50 Hallmark scores)
Top 10 most elevated and top 10 most suppressed Hallmark pathways for this sample.
Top 10 elevated
- WNT_BETA_CATENIN_SIGNALING+0.340
- UV_RESPONSE_DN+0.220
- MYOGENESIS+0.210
- PANCREAS_BETA_CELLS+0.190
- TGF_BETA_SIGNALING+0.160
- KRAS_SIGNALING_UP+0.150
- HEDGEHOG_SIGNALING+0.120
- P53_PATHWAY+0.060
- IL2_STAT5_SIGNALING+0.050
- HEME_METABOLISM+0.020
Top 10 suppressed
- MYC_TARGETS_V2-0.550
- E2F_TARGETS-0.450
- MTORC1_SIGNALING-0.440
- ESTROGEN_RESPONSE_EARLY-0.400
- MYC_TARGETS_V1-0.400
- ESTROGEN_RESPONSE_LATE-0.380
- G2M_CHECKPOINT-0.370
- GLYCOLYSIS-0.350
- INTERFERON_ALPHA_RESPONSE-0.330
- UNFOLDED_PROTEIN_RESPONSE-0.320
Patient twins — nearest pathway neighbors
10 samples closest to this one in 50-dim pathway space, drawn from the Pathway Atlas. Cosine similarity = 1 means identical pathway state.
10 twins match this tumor's tissue · 0 come from a different tissue of origin
| # | Sample | Cancer type | Subtype | cos similarity |
|---|---|---|---|---|
| 1 | SRR1313172 | — | A | 0.877 |
| 2 | SRR25617864 | — | A | 0.871 |
| 3 | MBCProject_0719_T3_RNA | — | A | 0.862 |
| 4 | SRR8613705 | — | A | 0.846 |
| 5 | TCGA-B6-A0IH-01A-11R-A115-07 | — | A | 0.840 |
| 6 | SRR8943020 | — | — | 0.833 |
| 7 | 20020052.LumA | — | A | 0.830 |
| 8 | MBCProject_3947_T1_RNA | — | A | 0.827 |
| 9 | TCGA-44-6148-01A-11R-1755-07 | — | cohortA1 | 0.825 |
| 10 | SRR11296806 | — | — | 0.820 |