b98a06c6-3b43-4749-98cf-b28f4ba06845
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Clinical attributes
From the source cohort, normalized into canonical keys plus the project's native columns.
- cancer_type
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- cancer_type_detailed
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- subtype
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GSVA pathway preview (50 Hallmark scores)
Top 10 most elevated and top 10 most suppressed Hallmark pathways for this sample.
Top 10 elevated
- PROTEIN_SECRETION+0.300
- G2M_CHECKPOINT+0.100
- MYC_TARGETS_V2+0.100
- SPERMATOGENESIS+0.100
- UV_RESPONSE_DN+0.100
- ANDROGEN_RESPONSE+0.000
- BILE_ACID_METABOLISM+0.000
- HEDGEHOG_SIGNALING+0.000
- KRAS_SIGNALING_DN+0.000
- PANCREAS_BETA_CELLS+0.000
Top 10 suppressed
- INTERFERON_ALPHA_RESPONSE-0.500
- INTERFERON_GAMMA_RESPONSE-0.500
- REACTIVE_OXYGEN_SPECIES_PATHWAY-0.500
- ADIPOGENESIS-0.400
- COMPLEMENT-0.400
- IL6_JAK_STAT3_SIGNALING-0.400
- INFLAMMATORY_RESPONSE-0.400
- TNFA_SIGNALING_VIA_NFKB-0.400
- ALLOGRAFT_REJECTION-0.300
- ANGIOGENESIS-0.300
Patient twins — nearest pathway neighbors
10 samples closest to this one in 50-dim pathway space, drawn from the Pathway Atlas. Cosine similarity = 1 means identical pathway state.
5 twins match this tumor's tissue · 5 come from a different tissue of origin ← cross-tissue dominant
| # | Sample | Cancer type | Subtype | cos similarity |
|---|---|---|---|---|
| 1 | SAMN03290913 | — | — | 0.881 |
| 2 | SRR1317808 | GTEX | — | 0.880 |
| 3 | SRR627451 | GTEX | — | 0.878 |
| 4 | SRR1434782 | GTEX | — | 0.874 |
| 5 | TCGA-A7-A0DC-01A-11R-A00Z-07 | — | D | 0.873 |
| 6 | MNG45 | — | — | 0.872 |
| 7 | s_150324_3b | EPN | Posterior Fossa EPN | 0.870 |
| 8 | SRR8613756 | — | E | 0.870 |
| 9 | SRR657997 | GTEX | — | 0.867 |
| 10 | a277c487-2d13-460f-a0d8-26acac1657d0 | — | — | 0.866 |