MNG1271
—
Clinical attributes
From the source cohort, normalized into canonical keys plus the project's native columns.
- cancer_type
- —
- cancer_type_detailed
- —
- subtype
- —
GSVA pathway preview (50 Hallmark scores)
Top 10 most elevated and top 10 most suppressed Hallmark pathways for this sample.
Top 10 elevated
- MITOTIC_SPINDLE+0.025
- PI3K_AKT_MTOR_SIGNALING+0.024
- KRAS_SIGNALING_DN+0.003
- SPERMATOGENESIS-0.028
- DNA_REPAIR-0.038
- HEME_METABOLISM-0.042
- BILE_ACID_METABOLISM-0.060
- MYC_TARGETS_V2-0.063
- APICAL_JUNCTION-0.071
- P53_PATHWAY-0.096
Top 10 suppressed
- ANGIOGENESIS-0.512
- HEDGEHOG_SIGNALING-0.491
- EPITHELIAL_MESENCHYMAL_TRANSITION-0.439
- ANDROGEN_RESPONSE-0.393
- CHOLESTEROL_HOMEOSTASIS-0.389
- NOTCH_SIGNALING-0.380
- HYPOXIA-0.354
- TNFA_SIGNALING_VIA_NFKB-0.335
- UV_RESPONSE_DN-0.328
- ALLOGRAFT_REJECTION-0.322
Patient twins — nearest pathway neighbors
10 samples closest to this one in 50-dim pathway space, drawn from the Pathway Atlas. Cosine similarity = 1 means identical pathway state.
6 twins match this tumor's tissue · 4 come from a different tissue of origin
| # | Sample | Cancer type | Subtype | cos similarity |
|---|---|---|---|---|
| 1 | SRR23303775 | — | — | 0.917 |
| 2 | SRR650134 | — | — | 0.914 |
| 3 | 20050097.LumA | — | B | 0.891 |
| 4 | SRR1313108 | — | B | 0.891 |
| 5 | TCGA-L9-A7SV-01A-11R-A39D-07 | — | cohortA1 | 0.890 |
| 6 | SRR607967 | GTEX | — | 0.888 |
| 7 | SRR1328960 | GTEX | — | 0.887 |
| 8 | SRR1467255 | GTEX | — | 0.886 |
| 9 | SRR1313096 | — | B | 0.885 |
| 10 | SRR627433 | GTEX | — | 0.885 |
Per-pathway drug coverage
For each elevated pathway in this tumor, the best-reversing drug across the catalog. Uncovered pathways = unmet need at pathway level for this one patient.
0 of 3 elevated pathways have at least one drug that meaningfully reverses them.
| Pathway (elevated) | tumor score | Best drug | reversal magnitude |
|---|---|---|---|
| MITOTIC_SPINDLE | 0.025 | Inavolisib | — uncovered |
| PI3K_AKT_MTOR_SIGNALING | 0.024 | Inavolisib | — uncovered |
| KRAS_SIGNALING_DN | 0.003 | Remibrutinib | — uncovered |