TCGA-FJ-A3Z9-01A-11R-A26T-07
—
Clinical attributes
From the source cohort, normalized into canonical keys plus the project's native columns.
- cancer_type
- —
- cancer_type_detailed
- —
- subtype
- —
- overall_survival_months
- 12.6478318
- os_event
- true
- sex
- Male
GSVA pathway preview (50 Hallmark scores)
Top 10 most elevated and top 10 most suppressed Hallmark pathways for this sample.
Top 10 elevated
- CHOLESTEROL_HOMEOSTASIS+0.240
- KRAS_SIGNALING_DN+0.210
- PEROXISOME+0.130
- BILE_ACID_METABOLISM+0.120
- NOTCH_SIGNALING+0.120
- WNT_BETA_CATENIN_SIGNALING+0.120
- ESTROGEN_RESPONSE_EARLY+0.050
- ESTROGEN_RESPONSE_LATE+0.050
- SPERMATOGENESIS+0.050
- HYPOXIA+0.030
Top 10 suppressed
- IL6_JAK_STAT3_SIGNALING-0.470
- INTERFERON_ALPHA_RESPONSE-0.470
- INTERFERON_GAMMA_RESPONSE-0.470
- ALLOGRAFT_REJECTION-0.440
- UNFOLDED_PROTEIN_RESPONSE-0.430
- INFLAMMATORY_RESPONSE-0.390
- EPITHELIAL_MESENCHYMAL_TRANSITION-0.370
- OXIDATIVE_PHOSPHORYLATION-0.340
- TNFA_SIGNALING_VIA_NFKB-0.340
- MYC_TARGETS_V1-0.330
Patient twins — nearest pathway neighbors
10 samples closest to this one in 50-dim pathway space, drawn from the Pathway Atlas. Cosine similarity = 1 means identical pathway state.
9 twins match this tumor's tissue · 1 come from a different tissue of origin
| # | Sample | Cancer type | Subtype | cos similarity |
|---|---|---|---|---|
| 1 | TCGA-S5-AA26-01A-11R-A38B-07 | — | — | 0.880 |
| 2 | MNG491 | — | — | 0.865 |
| 3 | TCGA-55-A494-01A-11R-A24X-07 | — | cohortA3 | 0.859 |
| 4 | TCGA-XF-A8HG-01A-11R-A36F-07 | — | — | 0.848 |
| 5 | BS_T4P3J13C | Posterior Fossa Ependymoma | — | 0.845 |
| 6 | TCGA-G2-A3IE-01A-11R-A20F-07 | — | — | 0.839 |
| 7 | BSR_16_0051_A2_S82 | — | A | 0.828 |
| 8 | SRR1516067 | — | — | 0.826 |
| 9 | eb67b977-b299-4bbc-b3f6-25d516473405 | — | — | 0.825 |
| 10 | MNG1005 | — | — | 0.825 |